FREIGHT BROKER PAYROLL · BROKERS, AGENTS & COMMISSION

Your whole sales floor is paid on margin. WageTime knows what a margin is.

Freight brokers earn on gross margin, the spread between the shipper rate and the carrier cost, not on salary. WageTime is payroll for freight brokerages, built to settle broker commission the way the brokerage actually books it.

Built on infrastructure processing $35B+ in payroll & taxes · 4.3M+ W-2s/1099s filed
SOUND FAMILIAR?

Generic payroll pays hours and salaries. Your whole sales floor gets paid on margin.

Freight brokers are paid on gross margin, the spread between the shipper rate and the carrier cost, not on the gross revenue most sales jobs pay against (industry brokerage guides, 2025-2026). A payroll system that only knows hours and salary cannot compute that, so the commission close moves to a spreadsheet, and the spreadsheet moves to Friday night.

THE MARGIN MATH

Paid on the spread, not the revenue

A broker who books a $10,000 load and covers it for $3,000 did not earn commission on $10,000. The commission is a percentage of the $7,000 margin, and the percentage itself tiers with the rep's book: near 50/50 for a new hire, 60/40 mid-career, 70/30 for an agent with established shippers. Generic payroll has one field for a bonus and no idea what a margin is.

THE DRAW NOBODY RECONCILES

An advance with no running total

New brokers ramp for months, so most brokerages carry them on a draw: a recoverable advance paid now against commission earned later. The rep only truly earns above the accumulated draw, and the unrecovered balance rolls into next month. Run that in a spreadsheet across six reps and the running balances drift, and every disputed paycheck starts with “what's my draw at?”

COMMISSION ON MONEY YOU HAVEN'T COLLECTED

Net-60 pays you after you paid them

The margin is booked the day the load delivers. The cash shows up on net-30, net-45, or net-60 terms, if it shows up at all. When a shipper stiffs the invoice, that commission was paid on money the brokerage never collected, and clawing it back by hand means finding which paycheck it rode out on.

TWO PAYROLLS, ONE SALES FLOOR

W-2 brokers here, 1099 agents there

In-house brokers are W-2: base salary plus a slice of margin. Independent agents are 1099, keeping most of the margin and working from a home office three states away. Come January that is W-2s from one system and 1099-NECs from another, plus a stack of state registrations for wherever the agents happen to live.

THE MONTH-END SPREADSHEET

The close that eats the last day

Every load's margin, every split, every draw offset, every chargeback, retyped into a workbook, reconciled by hand, then re-keyed a second time into a payroll system so the taxes come out right. Per-run pricing meters every one of those runs, and every retyped number is a commission dispute waiting to happen.

Every one of these is a commission-engine problem, and each has a concrete answer below.
01 · THE MARGIN COMMISSION

How do you pay a broker on gross margin instead of salary?

WageTime pays brokers on the margin they book: percentage-based comp settles through tiered commission structures, so the rate rides the rep's tier and applies to the spread, not the gross, and each commission run computes against booked margin automatically.

  • Off-cycle commission runs cost the same as scheduled ones.
  • Tier the rate by book maturity: 50/50, 60/40, 70/30, your call.
  • Base salary plus commission on one W-2 check.
  • Every rep sees margin, split, and payout on the stub.
  • Margin figures import from your system of record, no re-key.
app.wagetime.com/payroll/commission-run

Commission Run · Inside Brokers · July

Margin-based tiersComputed on the spread
Each rate rides the rep's tier and applies to booked margin, never to gross revenue
Dana R.70/30 senior$12,360.00
booked margin $41,200
Marcus T.60/40 mid$11,460.00
booked margin $28,650
Priya N.50/50 new$9,700.00
booked margin $19,400
Base salariesflat pay type$17,500.00
3 brokers · salary, not commission
Gross commission + base$50,020.00computed on booked margin

Replaces the margin workbook that gets retyped into a payroll system that only speaks salary.

02 · THE DRAW LEDGER

How do you carry a ramping broker on a draw without losing the balance?

A ramping rep gets carried on a draw-against-commission ledger with the running balance always in view: WageTime pays the recoverable advance out now, offsets it as commission comes in, and rolls the unrecovered remainder forward instead of letting it vanish into a spreadsheet cell.

  • Round-the-clock human support helps resolve a draw dispute.
  • Earned commission offsets the draw automatically.
  • Unrecovered draw rolls forward, month to month.
  • Threshold flags on reps under water too long.
  • Draw terms configurable per rep, guarantees to rookie advances.
app.wagetime.com/payroll/draw-ledger

Draw Ledger · Priya N. · Q3

Running balance tracked1 threshold flag
The advance pays out now, earned commission offsets it, and whatever is unrecovered rolls forward
MonthCommissionBalance
Maydraw paid $3,500.00$1,900.00-$1,600.00
Junedraw paid $3,500.00$2,800.00-$2,300.00
Julydraw paid $3,500.00$4,100.00-$1,700.00
Aug projecteddraw paid $3,500.00 · cleared$5,200.00$0.00
Draw recovers in Augbalance rolls forward until then

Replaces the six-tab draw spreadsheet where the balances quietly stopped matching.

03 · BROKERS AND AGENTS, ONE RUN

Can W-2 brokers and 1099 freight agents run in the same payroll across states?

W-2 in-house brokers and 1099 independent agents run as one payroll on WageTime: full withholding on the employee side, contractor setup with W-9 collection on the agent side, and year-end W-2s and 1099s both included.

  • Role-based access keeps commission data restricted by permission.
  • Contractor setup and year-end 1099s beside W-2s.
  • Work-state withholding for remote agents, effective-dated on relocation.
  • Multiple EINs under one login, reported per company or combined.
  • Rooftop-level tax setup wherever an agent's home office sits.
app.wagetime.com/payroll/run-register

Pay Run · July · Brokers + Agents

House brokers, independent agents6 states
Withholding follows each worker's work state, employee desk or contractor home office
11People paid
6Work states
WorkerNet payType
Dana R.Work state IL$9,214.60W-2 broker
Marcus T.Work state IL$8,640.12W-2 broker
Coastline Freight Agents LLCHome office TX$18,900.001099 agent
J. OkaforHome office OH$7,450.001099 agent
4 of 11 paid showntaxes and 1099s handled automatically

Replaces the W-2 payroll and the 1099 agent book kept as two systems that only meet at year-end.

04 · WHEN THE LOAD GOES UNPAID

What happens to a commission when the customer never pays?

When a booked load is never collected, WageTime nets a commission chargeback against the rep's next commission run, so the reversal follows the same rep and the same ledger instead of a manual clawback hunt. Credit policy stays yours; the netting mechanism is automatic.

  • Every chargeback appears on the rep's stub the same run it posts.
  • Reversal stays on the same rep, same ledger, fully dated.
  • Full audit logging with effective dating on every adjustment.
  • Scheduled reports: commission and chargebacks by rep, by month.
  • Hold commission until a net-30/45/60 invoice clears, if you choose.
app.wagetime.com/payroll/commission-adjustments

Commission Adjustments · August Run

Chargebacks nettedAudit log on
A chargeback nets against the same rep's next commission run, on the same ledger
RepAmountItem
Marcus T.Load #88214 · shipper net-60-$1,840.00Chargeback
Marcus T.August comm · booked margin$11,460.00Commission
Dana R.Load #87990 · invoice paid$2,210.00Hold released
Priya N.No adjustments this run$0.00Current
Net adjustments appliedevery reversal dated and logged

Replaces the clawback you tracked down by hand across three old paychecks.

PRICING

Simple payroll pricing. No surprises.

Full-service payroll is $10 a month per person paid that month, plus $50 a month per company, with unlimited runs. No long-term contracts, no per-run charges.

  • Full-service payroll, unlimited runs
  • Federal, state & local tax filing
  • Year-end W-2s & 1099s
  • Direct deposit, checks & pay cards
  • Contractor payments & filings
  • Off-cycle runs & bonuses, no extra fee
  • Employee paystubs & W-2 access
  • QuickBooks integration
$10/mo per person paid
+ $50/mo per company

Off-cycle runs and bonuses cost nothing extra. No long-term contracts; cancel anytime.

Example: 50 people paid × $10 + $50 company = $550 for the month

HR & hiring, onboarding, PTO, time tracking, benefits, and workers’ comp are optional add-ons, priced separately when you’re ready.

See a demo
THE INFRASTRUCTURE BEHIND WAGETIME
$35B+
in payroll & taxes paid
2.8M+
employees paid
4.3M+
W-2s & 1099s filed
100%
of tax filings automated

Freight brokerage payroll FAQ

How do you pay freight brokers on commission?

Freight brokers are paid on gross margin, the shipper rate minus the carrier cost, not on gross revenue. WageTime settles that as percentage-based comp through tiered commission structures, so each rep's rate rides their tier and applies to the booked margin, with base salary running as its own pay type on the same W-2 check.

Can I run a draw against commission for a new broker?

Yes. WageTime carries a ramping rep on a draw-against-commission ledger with the running balance shown: the advance pays out now, earned commission offsets it as it arrives, and any unrecovered draw rolls forward to the next month. Threshold flags surface a rep who has stayed under water too long.

Can W-2 brokers and 1099 freight agents run in the same payroll?

Yes. In-house W-2 brokers run with full withholding and 1099 independent agents run as contractors with W-9 collection, both in one run, with W-2s and 1099s included at year-end. Classifying a broker as W-2 or an agent as 1099 is your call with your attorney; WageTime runs both from one system so the agent book is not a second payroll.

How does payroll handle remote agents in different states?

Freight agents usually work from home offices, so tax setup follows each agent's work state, with withholding overrides, reciprocity, and effective-dated setup across all 50 states plus Puerto Rico and 11,000+ local jurisdictions. When an agent relocates, the change is effective-dated so the old state stops and the new state starts cleanly.

What happens to a commission if the customer never pays the invoice?

WageTime nets a commission chargeback against the rep's next commission run, so a reversal stays on the same ledger and is dated and logged rather than clawed back by hand. Whether you hold commission until a net-30/45/60 invoice clears or reverse a paid one on default is your credit policy; WageTime carries the mechanism.

What does payroll cost for a brokerage that pays commission monthly?

$50 a month for the company plus $10 for each person actually paid that month, with unlimited runs. A commission close often needs a same-day correction after a dispute or a late chargeback; that correction run is free, not a second bill. Whether the sales floor is 8 reps or 20, the plan scales by headcount paid, not by how many times you run it that month.

Bring one commission close.

Last month's commission workbook, your tier splits, and a draw or two in progress. In twenty minutes on a live demo company, a payroll specialist will build a margin-based commission run, show the draw ledger recovering, and put a W-2 broker and a 1099 agent in the same register.

Book a 20-minute demo